std::vector

Detailed Description

Specialized functions to read/write a std::vector from/to HDF5.

The following code writes a std::vector to an HDF5 file, reads the same vector and outputs it to stdout:

#include <h5/h5.hpp>
#include <iostream>
#include <vector>
 
int main() {
  // create file in read/write mode
  h5::file file("vec.h5", 'w');
 
 // write vector
 h5::write(file, "myvec", std::vector<double> { 1.1, 2.2, 3.3 });
 
  // read into vector
  std::vector<double> vec;
  h5::read(file, "myvec", vec);
 
  // output vector
  for (auto x : vec) std::cout << x << std::endl;
}

Output:

1.1
2.2
3.3

Contents of vec.h5:

HDF5 "vec.h5" {
GROUP "/" {
   DATASET "myvec" {
      DATATYPE  H5T_IEEE_F64LE
      DATASPACE  SIMPLE { ( 3 ) / ( 3 ) }
      DATA {
      (0): 1.1, 2.2, 3.3
      }
   }
}
}

Classes
struct	h5::hdf5_format_impl< std::vector< std::string > >
	Specialization of h5::hdf5_format_impl for std::vector<std::string>. More...
struct	h5::hdf5_format_impl< std::vector< T > >
	Specialization of h5::hdf5_format_impl for std::vector. More...

Functions
void	h5::from_char_buf (char_buf const &cb, std::vector< std::string > &v)
	Create a vector of strings from an h5::char_buf.
void	h5::from_char_buf (char_buf const &cb, std::vector< std::vector< std::string > > &v)
	Create a vector of vectors of strings from an h5::char_buf.
template<typename T >
void	h5::h5_read (group g, std::string name, std::vector< T > &v)
	Read a std::vector from an HDF5 dataset/subgroup.
void	h5::h5_read_attribute (object obj, std::string const &name, std::vector< std::string > &v)
	Read a vector of strings from an HDF5 attribute.
void	h5::h5_read_attribute (object obj, std::string const &name, std::vector< std::vector< std::string > > &v)
	Read a vector of vectors of strings from an HDF5 attribute.
template<typename T >
void	h5::h5_write (group g, std::string const &name, std::vector< T > const &v)
	Write a std::vector to an HDF5 dataset/subgroup.
void	h5::h5_write_attribute (object obj, std::string const &name, std::vector< std::string > const &v)
	Write a vectors of strings to an HDF5 attribute.
void	h5::h5_write_attribute (object obj, std::string const &name, std::vector< std::vector< std::string > > const &v)
	Write a vector of vectors of strings to an HDF5 attribute.
char_buf	h5::to_char_buf (std::vector< std::string > const &v)
	Create an h5::char_buf from a vector of strings.
char_buf	h5::to_char_buf (std::vector< std::vector< std::string > > const &v)
	Create an h5::char_buf from a vector of vectors of strings.

Function Documentation

from_char_buf() [1/2]

void h5::from_char_buf	(	char_buf const &	cb,
		std::vector< std::string > &	v )

#include <h5/stl/vector.cpp>

Create a vector of strings from an h5::char_buf.

Parameters

cb	h5::char_buf.
v	Vector of strings.

Definition at line 73 of file vector.cpp.

from_char_buf() [2/2]

void h5::from_char_buf	(	char_buf const &	cb,
		std::vector< std::vector< std::string > > &	v )

#include <h5/stl/vector.cpp>

Create a vector of vectors of strings from an h5::char_buf.

Parameters

cb	h5::char_buf.
v	Vector of vectors of strings.

Definition at line 90 of file vector.cpp.

h5_read()

template<typename T >

void h5::h5_read	(	group	g,
		std::string	name,
		std::vector< T > &	v )

#include <h5/stl/vector.hpp>

Read a std::vector from an HDF5 dataset/subgroup.

Depending on the type of T, the following is read:

• If T is a simple type (arithmetic or complex), a 1d dataset is read.
• If T is std::string, an h5::char_buf is read, i.e. a 2d dataset of char with dimensions (length of vector, max length of strings).
• Otherwise, it opens a subgroup and reads each element from the subgroup.

Template Parameters

T	Value tupe of std::vector.

Parameters

g	h5::group containing the dataset/subgroup.
name	Name of the dataset/subgroup from which the std::vector is read.
v	std::vector to read into.

Definition at line 149 of file vector.hpp.

h5_read_attribute() [1/2]

void h5::h5_read_attribute	(	object	obj,
		std::string const &	name,
		std::vector< std::string > &	v )

#include <h5/stl/vector.cpp>

Read a vector of strings from an HDF5 attribute.

Parameters

obj	Parent h5::object to which the attribute is attached.
name	Name of the attribute.
v	Vector of strings to read into.

Definition at line 116 of file vector.cpp.

h5_read_attribute() [2/2]

void h5::h5_read_attribute	(	object	obj,
		std::string const &	name,
		std::vector< std::vector< std::string > > &	v )

#include <h5/stl/vector.cpp>

Read a vector of vectors of strings from an HDF5 attribute.

Parameters

obj	h5::object to which the attribute is attached.
name	Name of the attribute.
v	Vector of vectors of strings to read into.

Definition at line 122 of file vector.cpp.

h5_write()

template<typename T >

void h5::h5_write	(	group	g,
		std::string const &	name,
		std::vector< T > const &	v )

#include <h5/stl/vector.hpp>

Write a std::vector to an HDF5 dataset/subgroup.

Depending on the type of T, the following is written:

• If T is a simple type (arithmetic or complex), a 1d dataset is written.
• If T is std::string, an h5::char_buf is written, i.e. a 2d dataset of char with dimensions (length of vector, max length of strings).
• Otherwise, it creates a subgroup and writes each element to the subgroup.

Template Parameters

T	Value tupe of std::vector.

Parameters

g	h5::group in which the dataset/subgroup is created.
name	Name of the dataset/subgroup to which the std::vector is written.
v	std::vector to be written.

Definition at line 119 of file vector.hpp.

h5_write_attribute() [1/2]

void h5::h5_write_attribute	(	object	obj,
		std::string const &	name,
		std::vector< std::string > const &	v )

#include <h5/stl/vector.cpp>

Write a vectors of strings to an HDF5 attribute.

Parameters

obj	h5::object to which the attribute is attached.
name	Name of the attribute.
v	Vector of strings to be written.

Definition at line 110 of file vector.cpp.

h5_write_attribute() [2/2]

void h5::h5_write_attribute	(	object	obj,
		std::string const &	name,
		std::vector< std::vector< std::string > > const &	v )

#include <h5/stl/vector.cpp>

Write a vector of vectors of strings to an HDF5 attribute.

Parameters

obj	h5::object to which the attribute is attached.
name	Name of the attribute.
v	Vector of vectors of strings to be written.

Definition at line 112 of file vector.cpp.

to_char_buf() [1/2]

char_buf h5::to_char_buf

(

std::vector< std::string > const &

v

)

#include <h5/stl/vector.cpp>

Create an h5::char_buf from a vector of strings.

Parameters

v	Vector of strings.

Returns

h5::char_buf containing the strings.

Definition at line 33 of file vector.cpp.

to_char_buf() [2/2]

char_buf h5::to_char_buf

(

std::vector< std::vector< std::string > > const &

v

)

#include <h5/stl/vector.cpp>

Create an h5::char_buf from a vector of vectors of strings.

Parameters

v	Vector of a vector of strings.

Returns

h5::char_buf containing the strings.

Definition at line 52 of file vector.cpp.